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期刊论文 [27]
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DeepDigest: Prediction of Protein Proteolytic Digestion with Deep Learning
期刊论文
ANALYTICAL CHEMISTRY, 2021, 卷号: 93, 期号: 15, 页码: 6094-6103
作者:
Yang, Jinghan
;
Gao, Zhiqiang
;
Ren, Xiuhan
;
Sheng, Jie
;
Xu, Ping
收藏
  |  
浏览/下载:11/0
  |  
提交时间:2021/10/26
Predicting HIV-1 Protease Cleavage Sites With Positive-Unlabeled Learning
期刊论文
FRONTIERS IN GENETICS, 2021, 卷号: 12, 期号: 3, 页码: 1-11
作者:
Li, ZF (Li, Zhenfeng)[ 1 ]
;
Hu, L (Hu, Lun)[ 2 ]
;
Tang, ZH (Tang, Zehai)[ 1 ]
;
Zhao, C (Zhao, Cheng)[ 1 ]
收藏
  |  
浏览/下载:30/0
  |  
提交时间:2021/05/06
HIV-1 protease
cleavage site prediction
positive-unlabeled learning
biased SVM
substrate specificity
Incorporating the Coevolving Information of Substrates in Predicting HIV-1 Protease Cleavage Sites
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 6, 页码: 2017-2028
作者:
Hu, Lun
;
Hu, Pengwei
;
Luo, Xin
;
Yuan, Xiaohui
;
You, Zhu-Hong
收藏
  |  
浏览/下载:21/0
  |  
提交时间:2021/03/01
HIV-1 protease
substrate specificity
coevolving information
cleavage site prediction
PredictFP2: A New Computational Model to Predict Fusion Peptide Domain in All Retroviruses
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 5, 页码: 1714-1720
作者:
Wu, Sijia
;
Wu, Xiaoming
;
Tian, Jie
;
Zhou, Xiaobo
;
Huang, Liyu
收藏
  |  
浏览/下载:64/0
  |  
提交时间:2021/01/07
Benchmark testing
Amino acids
Support vector machines
Computational modeling
Predictive models
Cells (biology)
Databases
Fusion peptide prediction
FP distribution
hydrophobicity
retrovirus
support vector machine
Development of a luciferase-based biosensor to assess enterovirus 71 3c protease activity in living cells
期刊论文
Scientific reports, 2017, 卷号: 7, 页码: 11
作者:
Zhang, Yuan
;
Ke, Xianliang
;
Zheng, Caishang
;
Liu, Yan
;
Xie, Li
收藏
  |  
浏览/下载:30/0
  |  
提交时间:2019/05/08
Identification of cold-inducible microRNAs in grapevine
期刊论文
FRONTIERS IN PLANT SCIENCE, 2015, 卷号: 6, 页码: 13
作者:
Xin, Haiping
;
Sun, Xiaoming
;
Fan, Gaotao
;
Su, Lingye
;
Wang, Wanjun
收藏
  |  
浏览/下载:17/0
  |  
提交时间:2017/04/13
Vitis vinifera
microRNA
cold-inducible
abiotic stress
Solexa
Feature Selection Combined with Neural Network Structure Optimization for HIV-1 Protease Cleavage Site Prediction
期刊论文
BIOMED RESEARCH INTERNATIONAL, 2015, 卷号: 2015, 页码: 263586
作者:
Liu, Hui
;
Shi, Xiaomiao
;
Guo, Dongmei
;
Zhao, Zuowei
;
Yimin
收藏
  |  
浏览/下载:7/0
  |  
提交时间:2019/12/09
Identification of cold-inducible microRNAs in grapevine
期刊论文
FRONTIERS IN PLANT SCIENCE, 2015, 卷号: 6
作者:
Sun, Xiaoming
;
Fan, Gaotao
;
Su, Lingye
;
Wang, Wanjun
;
Liang, Zhenchang
收藏
  |  
浏览/下载:9/0
  |  
提交时间:2022/09/13
Vitis vinifera
microRNA
cold-inducible
abiotic stress
Solexa
Targeted editing of goat genome with modular-assembly zinc finger nucleases based on activity prediction by computational molecular modeling
期刊论文
MOLECULAR BIOLOGY REPORTS, 2013, 卷号: 40, 期号: 7, 页码: 4251-4256
作者:
Xiong, Kai
;
Li, Shanshan
;
Zhang, Hongxiao
;
Cui, Ye
;
Yu, Debing
收藏
  |  
浏览/下载:19/0
  |  
提交时间:2019/01/08
ZFN
Genome editing
Modular-assembly
BLG
Molecular modeling
Goat
Predicting Protein N-Terminal Signal Peptides Using Position-Specific Amino Acid Propensities and Conditional Random Fields
期刊论文
CURRENT BIOINFORMATICS, 2013, 卷号: 8, 期号: 2, 页码: 183-192
作者:
Fan, Yong-Xian
;
Song, Jiangning
;
Xu, Chen
;
Shen, Hong-Bin
收藏
  |  
浏览/下载:10/0
  |  
提交时间:2016/06/22
Conditional random fields (CRFs)
hydrophobicity alignment
position-specific amino acid propensities
secretory protein
signal peptide
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