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Optical Sensors and Actuators for Probing Proximity-Dependent Biotinylation in Living Cells
期刊论文
FRONTIERS IN CELLULAR NEUROSCIENCE, 2022, 卷号: 16
作者:
Chen, Rui
;
Zhang, Ningxia
;
Zhou, Yubin
;
Jing, Ji
收藏
  |  
浏览/下载:44/0
  |  
提交时间:2022/03/28
proximity labeling
TurboID
optogenetics
OptoID
biotinylation
An Efficient Computational Model for Large-Scale Prediction of Protein-Protein Interactions Based on Accurate and Scalable Graph Embedding
期刊论文
FRONTIERS IN GENETICS, 2021, 卷号: 12, 期号: 2, 页码: 1-10
作者:
Su, XR (Su, Xiao-Rui)[ 1,2,3 ]
;
You, ZH (You, Zhu-Hong)[ 1,2,3 ]
;
Hu, L (Hu, Lun)[ 1,2,3 ]
;
Huang, YA (Huang, Yu-An)[ 1 ]
;
Wang, Y (Wang, Yi)[ 1,2,3 ]
收藏
  |  
浏览/下载:31/0
  |  
提交时间:2021/05/24
large-scale
protein-protein interaction
GraphZoom
weighted graph
graph embedding
A survey of current trends in computational predictions of protein-protein interactions
期刊论文
FRONTIERS OF COMPUTER SCIENCE, 2020, 卷号: 14, 期号: 4, 页码: 1-9
作者:
Wang, YB (Wang, Yanbin)[ 1,2 ]
;
You, ZH (You, Zhuhong)[ 1 ]
;
Li, LP (Li, Liping)[ 1 ]
;
Chen, ZH (Chen, Zhanheng)[ 1,2 ]
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  |  
浏览/下载:25/0
  |  
提交时间:2020/04/23
proteomics
protein-protein interactions
protein feature extraction
computational proteomics
Using Weighted Extreme Learning Machine Combined With Scale-Invariant Feature Transform to Predict Protein-Protein Interactions From Protein Evolutionary Information
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 5, 页码: 1546-1554
作者:
Li, JQ (Li, Jianqiang)[ 1 ]
;
Shi, XF (Shi, Xiaofeng)[ 1 ]
;
You, ZH (You, Zhu-Hong)[ 2 ]
;
Yi, HC (Yi, Hai-Cheng)[ 2 ]
;
Chen, ZZ (Chen, Zhuangzhuang)[ 1 ]
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  |  
浏览/下载:30/0
  |  
提交时间:2020/10/23
Protein-protein interactions
scale-invariant feature transform
weighted extreme learning machine
A Novel Matrix of Sequence Descriptors for Predicting Protein-Protein Interactions from Amino Acid Sequences.
期刊论文
Plos one, 2019
作者:
Wang X(王雪)
;
Yuejin Wu
;
Rujing Wang
;
Yuanyuan Wei
;
Yuanmiao Gui
收藏
  |  
浏览/下载:12/0
  |  
提交时间:2021/12/15
A novel conjoint triad auto covariance (CTAC) coding method for predicting protein-protein interaction based on amino acid sequence.
期刊论文
Mathematical Biosciences, 2019
作者:
Wang X(王雪)
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  |  
浏览/下载:5/0
  |  
提交时间:2021/12/15
Deep neural networks
Protein-protein interaction
Conjoint triad auto covariance
Comparison of feature extraction methods for protein-protein interactions based on deep neural networks.
期刊论文
Journal of Investigative Medicine, 2019
作者:
Wang X(王雪)
;
Rj Wang
;
YY Wei
;
YM Gui
收藏
  |  
浏览/下载:12/0
  |  
提交时间:2021/12/15
Prediction of Self-Interacting Proteins from Protein Sequence Information Based on Random Projection Model and Fast Fourier Transform
期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 卷号: 20, 期号: 4, 页码: 1-15
作者:
Chen, ZH (Chen, Zhan-Heng)[ 1,2 ]
;
You, ZH (You, Zhu-Hong)[ 1,2 ]
;
Li, LP (Li, Li-Ping)[ 1 ]
;
Wang, YB (Wang, Yan-Bin)[ 1 ]
;
Wong, L (Wong, Leon)[ 1,2 ]
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  |  
浏览/下载:53/0
  |  
提交时间:2019/05/16
self-interacting proteins
position-specific scoring matrix
fast Fourier transform
random projection
A High Efficient Biological Language Model for Predicting Protein-Protein Interactions
期刊论文
CELLS, 2019, 卷号: 8, 期号: 2, 页码: 1-12
作者:
Wang, YB (Wang, Yanbin)[ 1,2 ]
;
You, ZH (You, Zhu-Hong)[ 1 ]
;
Yang, S (Yang, Shan)[ 1,2 ]
;
Li, X (Li, Xiao)[ 1 ]
;
Jiang, TH (Jiang, Tong-Hai)[ 1 ]
收藏
  |  
浏览/下载:118/0
  |  
提交时间:2019/05/16
protein-protein interactions
bio-language processing
sentencepiece
convolution neural network
unigram language model
Improved Prediction of Protein-Protein Interactions Using Descriptors Derived From PSSM via Gray Level Co-Occurrence Matrix
期刊论文
IEEE ACCESS, 2019, 卷号: 7, 期号: 4, 页码: 49456-49465
作者:
Zhu, HJ (Zhu, Hui-Juan)[ 1 ]
;
You, ZH (You, Zhu-Hong)[ 2,3 ]
;
Shi, WL (Shi, Wei-Lei)[ 2 ]
;
Xu, SK (Xu, Shou-Kun)[ 4 ]
;
Jiang, TH (Jiang, Tong-Hai)[ 2,3 ]
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  |  
浏览/下载:108/0
  |  
提交时间:2019/05/16
Protein-protein interactions
rotation forest
position-specific scoring matrix
gray level co-occurrence matrix
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