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科研机构
大连理工大学 [37]
深圳先进技术研究院 [1]
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期刊论文 [34]
会议论文 [4]
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2019 [3]
2018 [4]
2017 [3]
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Reinforce: An Ensemble Approach for Inferring PPI Network from AP-MS Data
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2019, 卷号: 16, 页码: 365-376
作者:
Tian, Bo
;
Duan, Qiong
;
Zhao, Can
;
Teng, Ben
;
He, Zengyou
收藏
  |  
浏览/下载:60/0
  |  
提交时间:2019/12/02
Protein-protein interactions
affinity purification
mass spectrometry
rank aggregation
Significance-based discriminative sequential pattern mining
期刊论文
EXPERT SYSTEMS WITH APPLICATIONS, 2019, 卷号: 122, 页码: 54-64
作者:
He, Zengyou
;
Zhang, Simeng
;
Wu, Jun
收藏
  |  
浏览/下载:10/0
  |  
提交时间:2019/12/02
Sequential pattern
Discriminative pattern
Multiple hypothesis testing
Family-wise error rate
False discovery rate
Mining conditional discriminative sequential patterns
期刊论文
INFORMATION SCIENCES, 2019, 卷号: 478, 页码: 524-539
作者:
He, Zengyou
;
Zhang, Simeng
;
Gu, Feiyang
;
Wu, Jun
收藏
  |  
浏览/下载:8/0
  |  
提交时间:2019/12/02
Sequential pattern
Discriminative pattern
Pattern mining
Pattern-based classification
RPML: A Learning-Based Approach for Reranking Protein-Spectrum Matches
会议论文
INTELLIGENT COMPUTING THEORIES AND APPLICATION, PT I, 2018-01-01
作者:
Duan, Qiong
;
Liang, Hao
;
Sheng, Chaohua
;
Wu, Jun
;
Xu, Bo
收藏
  |  
浏览/下载:17/0
  |  
提交时间:2019/12/02
Protein identification
Protein-spectrum matches
Machine learning
Rerank method
PCM: A Pairwise Correlation Mining Package for Biological Network Inference
会议论文
INTELLIGENT COMPUTING THEORIES AND APPLICATION, PT II, 2018-01-01
作者:
Liang, Hao
;
Gu, Feiyang
;
Sheng, Chaohua
;
Duan, Qiong
;
Tian, Bo
收藏
  |  
浏览/下载:25/0
  |  
提交时间:2019/12/02
Pairwise correlation
Network inference
Correlation mining
Protein complexes identification based on go attributed network embedding
期刊论文
BMC BIOINFORMATICS, 2018, 卷号: 19, 页码: 535
作者:
Xu, Bo
;
Li, Kun
;
Zheng, Wei
;
Liu, Xiaoxia
;
Zhang, Yijia
收藏
  |  
浏览/下载:6/0
  |  
提交时间:2019/12/02
Protein complexes identification
Protein-protein interaction network
Network embedding
Reconstruction of the Protein-Protein Interaction Network for Protein Complexes Identification by Walking on the Protein Pair Fingerprints Similarity Network
期刊论文
FRONTIERS IN GENETICS, 2018, 卷号: 9, 页码: 272
作者:
Xu, Bo
;
Liu, Yu
;
Lin, Chi
;
Dong, Jie
;
Liu, Xiaoxia
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/02
protein complex
PPI network
network reconstruction
PPI prediction
bioinformatic
Conditional discriminative pattern mining: Concepts and algorithms
期刊论文
INFORMATION SCIENCES, 2017, 卷号: 375, 页码: 1-15
作者:
He, Zengyou
;
Gu, Feiyang
;
Zhao, Can
;
Liu, Xiaoqing
;
Wu, Jun
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/02
Discriminative pattern
Emerging pattern
Contrast sets
Subgroup discovery
Data mining
Inferring MicroRNA-Disease Associations by Random Walk on a Heterogeneous Network with Multiple Data Sources
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2017, 卷号: 14, 页码: 905-915
作者:
Liu, Yuansheng
;
Zeng, Xiangxiang
;
He, Zengyou
;
Zou, Quan
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/03
MiRNA-disease association prediction
similarity measurement
random walk with restart
A two-step framework for inferring direct protein-protein interaction network from AP-MS data
期刊论文
10th International Conference on Computational and Systems Biology (ISB), 2017, 卷号: 11, 页码: 82
作者:
Tian, Bo
;
Zhao, Can
;
Gu, Feiyang
;
He, Zengyou
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/12/03
Protein-protein interactions
Affinity purification
Mass spectrometry
Network deconvolution
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