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数学与系统科学研究院 [3]
上海药物研究所 [3]
计算技术研究所 [2]
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近代物理研究所 [1]
烟台海岸带研究所 [1]
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期刊论文 [11]
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2021 [11]
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Coupling between Ribotypic and Phenotypic Traits of Protists across Life Cycle Stages and Temperatures
期刊论文
MICROBIOLOGY SPECTRUM, 2021, 卷号: 9, 期号: 3, 页码: 19
作者:
Zou, Songbao
;
Fu, Rao
;
Deng, Huiwen
;
Zhang, Qianqian
;
Gentekaki, Eleni
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  |  
浏览/下载:18/0
  |  
提交时间:2022/08/13
cell size
copy number variation
growth rate
life cycle
warming
Identifying phenotype-associated subpopulations by integrating bulk and single-cell sequencing data
期刊论文
NATURE BIOTECHNOLOGY, 2021, 页码: 18
作者:
Sun, Duanchen
;
Guan, Xiangnan
;
Moran, Amy E.
;
Wu, Ling-Yun
;
Qian, David Z.
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  |  
浏览/下载:28/0
  |  
提交时间:2022/04/02
Genome and transcriptome-based characterization of high energy carbon-ion beam irradiation induced delayed flower senescence mutant in Lotus japonicus
期刊论文
BMC Plant Biology, 2021, 卷号: 21, 期号: 1, 页码: 19
作者:
Du,Yan
;
Luo,Shanwei
;
Zhao,Jian
;
Feng,Zhuo
;
Chen,Xia
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  |  
浏览/下载:32/0
  |  
提交时间:2021/12/08
Lotus japonicus
Flower senescence-delayed
Carbon-ion beam irradiation
Whole genome re-sequencing
RNA-seq
Phytohormone
Tumor cells generate astrocyte-like cells that contribute to SHH-driven medulloblastoma relapse
期刊论文
JOURNAL OF EXPERIMENTAL MEDICINE, 2021, 卷号: 218, 期号: 9, 页码: 22
作者:
Guo, Duancheng
;
Wang, Yuan
;
Cheng, Yan
;
Liao, Shengyou
;
Hu, Jian
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  |  
浏览/下载:25/0
  |  
提交时间:2021/12/01
Transcriptome Regulation by Oncogenic ALK Pathway in Mammalian Cortical Development Revealed by Single-Cell RNA Sequencing
期刊论文
CEREBRAL CORTEX, 2021, 卷号: 31, 期号: 8, 页码: 3911-3924
作者:
Mao, Rui
;
Zhang, Xiaoyun
;
Kong, Youyong
;
Wu, Shanshan
;
Huo, Hai-qin
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  |  
浏览/下载:33/0
  |  
提交时间:2021/08/17
anaplastic lymphoma kinase
cerebral organoid
neurodevelopment
neural progenitor cell
single-cell RNA sequencing
Transcriptome landscape of double negative T cells by single-cell RNA sequencing
期刊论文
JOURNAL OF AUTOIMMUNITY, 2021, 卷号: 121, 页码: 15
作者:
Yang, Lu
;
Zhu, Yanbing
;
Tian, Dan
;
Wang, Song
;
Guo, Jincheng
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  |  
浏览/下载:31/0
  |  
提交时间:2021/12/01
Double negative T cell
Single-cell RNA sequencing
Unconventional T cells
Inflammation
Regulatory T cells
Innate immunity
Rescue of maternal immune activation-induced behavioral abnormalities in adult mouse offspring by pathogen-activated maternal T-reg cells
期刊论文
NATURE NEUROSCIENCE, 2021, 页码: 33
作者:
Xu, Zhipeng
;
Zhang, Xiaoyun
;
Chang, Hao
;
Kong, Yue
;
Ni, Yangyue
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  |  
浏览/下载:85/0
  |  
提交时间:2021/05/24
A kernel non-negative matrix factorization framework for single cell clustering
期刊论文
APPLIED MATHEMATICAL MODELLING, 2021, 卷号: 90, 页码: 875-888
作者:
Jiang, Hao
;
Yi, Ming
;
Zhang, Shihua
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  |  
浏览/下载:9/0
  |  
提交时间:2021/04/26
Single cell RNA-sequencing
Kernel non-negative matrix factorization
Cellular heterogeneity
PI3K alpha inhibitor CYH33 triggers antitumor immunity in murine breast cancer by activating CD8(+)T cells and promoting fatty acid metabolism
期刊论文
JOURNAL FOR IMMUNOTHERAPY OF CANCER, 2021, 卷号: 9, 期号: 8, 页码: 16
作者:
Sun, Pu
;
Zhang, Xi
;
Wang, Rong-Jing
;
Ma, Qing-Yang
;
Xu, Lan
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  |  
浏览/下载:42/0
  |  
提交时间:2021/11/04
tumor microenvironment
immunomodulation
immunologic memory
lymphocytes
tumor-infiltrating
macrophages
Imputing single-cell RNA-seq data by considering cell heterogeneity and prior expression of dropouts
期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2021, 卷号: 13, 期号: 1, 页码: 29-40
作者:
Zhang, Lihua
;
Zhang, Shihua
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  |  
浏览/下载:14/0
  |  
提交时间:2021/10/26
single-cell RNA-seq
dropout
imputation
low-rank
systems biology
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