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Accurate and Efficient Estimation of Lennard-Jones Interactions for Coarse-Grained Particles via a Potential Matching Method 期刊论文
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2022, 卷号: 18, 期号: 8, 页码: 4879-4890
作者:  Zhang, Yuwei;  Wang, Yunchu;  Xia, Fei;  Cao, Zexing;  Xu, Xin
收藏  |  浏览/下载:10/0  |  提交时间:2023/02/07
An Integrative Framework for Combining Sequence and Epigenomic Data to Predict Transcription Factor Binding Sites Using Deep Learning 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2021, 卷号: 18, 期号: 1, 页码: 355-364
作者:  Jing, Fang;  Zhang, Shao-Wu;  Cao, Zhen;  Zhang, Shihua
收藏  |  浏览/下载:11/0  |  提交时间:2021/04/26
Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation 期刊论文
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1, 页码: 20
作者:  Xin, Jingxue;  Zhang, Hui;  He, Yaoxi;  Duren, Zhana;  Bai, Caijuan
收藏  |  浏览/下载:73/0  |  提交时间:2021/01/14
Probe Efficient Feature Representation of Gapped K-mer Frequency Vectors from Sequences Using Deep Neural Networks 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 2, 页码: 657-667
作者:  Cao, Zhen;  Zhang, Shihua
收藏  |  浏览/下载:28/0  |  提交时间:2020/05/24
zokordbtissuespecificregulatorynetworkannotationfornoncodingelementsofplateauzokor 期刊论文
quantitativebiology, 2020, 卷号: 8, 期号: 1, 页码: 43-50
作者:  Xin Jingxue;  Hao Junjun;  Chen Lang;  Zhang Tao;  Li Lei
收藏  |  浏览/下载:111/0  |  提交时间:2020/06/30
ZokorDB: tissue specific regulatory network annotation for non-coding elements of plateau zokor 期刊论文
定量生物学:英文版, 2020, 卷号: 8.0, 期号: 1.0, 页码: 43-50
作者:  Jingxue Xin;  Junjun Hao;  Lang Chen;  Tao Zhang;  Lei Li
收藏  |  浏览/下载:61/0  |  提交时间:2021/01/14
Simple tricks of convolutional neural network architectures improve DNA-protein binding prediction 期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 11, 页码: 1837-1843
作者:  Cao, Zhen;  Zhang, Shihua
收藏  |  浏览/下载:34/0  |  提交时间:2020/01/10
The cis-trans binding strength defined by motif frequencies facilitates statistical inference of transcriptional regulation 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 11
作者:  Feng, Yance;  Zhang, Sheng;  Li, Liang;  Li, Lei M.
收藏  |  浏览/下载:51/0  |  提交时间:2019/10/28
Modeling gene regulation from paired expression and chromatin accessibility data 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 卷号: 114, 期号: 25, 页码: E4914-E4923
作者:  Duren, Zhana;  Chen, Xi;  Jiang, Rui;  Wang, Yong;  Wong, Wing Hung
收藏  |  浏览/下载:16/0  |  提交时间:2018/07/30
Optimal policy design for photovoltaic power industry with positive externality in China 期刊论文
RESOURCES CONSERVATION AND RECYCLING, 2016, 卷号: 115, 页码: 22-30
作者:  Wu, Tian;  Zhou, Wei;  Yan, Xiaoyu;  Ou, Xunmin
收藏  |  浏览/下载:16/0  |  提交时间:2018/07/30


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