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ScLSTM: single-cell type detection by siamese recurrent network and hierarchical clustering 期刊论文
BMC BIOINFORMATICS, 2023, 卷号: 24, 期号: 1, 页码: 15
作者:  Jiang, Hanjing;  Huang, Yabing;  Li, Qianpeng;  Feng, Boyuan
收藏  |  浏览/下载:1/0  |  提交时间:2023/12/21
Deciphering the Spatial Modular Patterns of Tissues by Integrating Spatial and Single-Cell Transcriptomic Data 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2022, 页码: 14
作者:  Shan, Xu;  Chen, Jinyu;  Dong, Kangning;  Zhou, Wei;  Zhang, Shihua
收藏  |  浏览/下载:8/0  |  提交时间:2023/02/07
Spectral clustering of single cells using Siamese nerual network combined with improved affinity matrix 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022, 页码: 12
作者:  Jiang, Hanjing;  Huang, Yabing;  Li, Qianpeng
收藏  |  浏览/下载:18/0  |  提交时间:2022/06/10
hDirect-MAP: projection-free single-cell modeling of response to checkpoint immunotherapy 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022, 卷号: 23, 期号: 2, 页码: 16
作者:  Lu, Yong;  Xue, Gang;  Zheng, Ningbo;  Han, Kun;  Yang, Wenzhong
收藏  |  浏览/下载:13/0  |  提交时间:2023/02/07
An Efficient and Universal Protoplast Isolation Protocol Suitable for Transient Gene Expression Analysis and Single-Cell RNA Sequencing 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 卷号: 23, 期号: 7
作者:  Wang, Juanjuan;  Wang, Yang;  Lu, Tianfeng;  Yang, Xia;  Liu, Jing
收藏  |  浏览/下载:0/0  |  提交时间:2024/03/07
Identifying phenotype-associated subpopulations by integrating bulk and single-cell sequencing data 期刊论文
NATURE BIOTECHNOLOGY, 2021, 页码: 18
作者:  Sun, Duanchen;  Guan, Xiangnan;  Moran, Amy E.;  Wu, Ling-Yun;  Qian, David Z.
收藏  |  浏览/下载:28/0  |  提交时间:2022/04/02
Transcriptome Regulation by Oncogenic ALK Pathway in Mammalian Cortical Development Revealed by Single-Cell RNA Sequencing 期刊论文
CEREBRAL CORTEX, 2021, 卷号: 31, 期号: 8, 页码: 3911-3924
作者:  Mao, Rui;  Zhang, Xiaoyun;  Kong, Youyong;  Wu, Shanshan;  Huo, Hai-qin
收藏  |  浏览/下载:34/0  |  提交时间:2021/08/17
A kernel non-negative matrix factorization framework for single cell clustering 期刊论文
APPLIED MATHEMATICAL MODELLING, 2021, 卷号: 90, 页码: 875-888
作者:  Jiang, Hao;  Yi, Ming;  Zhang, Shihua
收藏  |  浏览/下载:9/0  |  提交时间:2021/04/26
Imputing single-cell RNA-seq data by considering cell heterogeneity and prior expression of dropouts 期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2021, 卷号: 13, 期号: 1, 页码: 29-40
作者:  Zhang, Lihua;  Zhang, Shihua
收藏  |  浏览/下载:14/0  |  提交时间:2021/10/26
NeuralEE: A GPU-Accelerated Elastic Embedding Dimensionality Reduction Method for Visualizing Large-Scale scRNA-Seq Data 期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 11, 页码: 8
作者:  Xiong, Jiankang;  Gong, Fuzhou;  Wan, Lin;  Ma, Liang
收藏  |  浏览/下载:20/0  |  提交时间:2021/01/14


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