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期刊论文 [8]
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Deep template-based protein structure prediction
期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2021, 卷号: 17, 期号: 5, 页码: 18
作者:
Wu, Fandi
;
Xu, Jinbo
收藏
  |  
浏览/下载:21/0
  |  
提交时间:2021/12/01
Protein Inter-residue Contacts Prediction: Methods, Performances and Applications
期刊论文
CURRENT BIOINFORMATICS, 2019, 卷号: 14, 期号: 3
作者:
Jing, Xiaoyang
;
Dong, Qimin
;
Lu, Ruqian
;
Dong, Qiwen
收藏
  |  
浏览/下载:17/0
  |  
提交时间:2019/12/05
Protein inter-residue contacts prediction
protein structure prediction
correlated mutations
residue coevolution
machine-learning
fusion method
Improving residue-residue contact prediction via low-rank and sparse decomposition of residue correlation matrix
期刊论文
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2016, 卷号: 472, 期号: 1, 页码: 217-222
作者:
Zhang, HC
;
Gao, YJ
;
Deng, MH
;
Wang, C
;
Zhu, JW
收藏
  |  
浏览/下载:14/0
  |  
提交时间:2019/04/08
Protein contacts prediction
MULTIPLE SEQUENCE ALIGNMENTS
Correlation analysis
COEVOLUTION
Background correlation removal
MUTATIONS
Low-rank and sparse matrix decomposition
PROTEINS
EVOLUTIONARY
INFORMATION
COVARIANCE
SEARCH
Improving residue-residue contact prediction via low-rank and sparse decomposition of residue correlation matrix
其他
2016-01-01
Zhang, Haicang
;
Gao, Yujuan
;
Deng, Minghua
;
Wang, Chao
;
Zhu, Jianwei
;
Li, Shuai Cheng
;
Zheng, Wei-Mou
;
Bu, Dongbo
收藏
  |  
浏览/下载:7/0
  |  
提交时间:2017/12/03
Protein contacts prediction
Correlation analysis
Background correlation removal
Low-rank and sparse matrix decomposition
MULTIPLE SEQUENCE ALIGNMENTS
COEVOLUTION
MUTATIONS
PROTEINS
EVOLUTIONARY
INFORMATION
COVARIANCE
SEARCH
New insights into substrate folding preference of plant OSCs
期刊论文
Science Bulletin, 2016, 卷号: 61, 期号: 18, 页码: 1407-1412
作者:
Ma Yongshuo
;
Zhou Yuan
;
Ovchinnikov Sergey
;
Jr Per Greisen
;
Huang Sanwen
收藏
  |  
浏览/下载:7/0
  |  
提交时间:2017/04/19
Oxidosqualene cyclase
Homology modeling
Residue coevolution
Substrate folding
Integrated Analysis of Residue Coevolution and Protein Structures Capture Key Protein Sectors in HIV-1 Proteins
期刊论文
PLOS ONE, 2015, 卷号: 10, 期号: 2, 页码: e0117506
作者:
Zhao YQ[*]
;
Wang YJ
;
Gao YD
;
Li GH
;
Huang JF[*]
收藏
  |  
浏览/下载:14/0
  |  
提交时间:2015/03/13
Identifying Coevolution Between Amino Acid Residues in Protein Families: Advances in the Improvement and Evaluation of Correlated Mutation Algorithms
期刊论文
CURRENT BIOINFORMATICS, 2013, 卷号: 8, 期号: 2, 页码: 148-160
作者:
Xu, Haisong
;
Li, Xiaoqin
;
Zhang, Ziding
;
Song, Jiangning
收藏
  |  
浏览/下载:16/0
  |  
提交时间:2016/06/22
Coevolution analysis
correlated mutation algorithms
molecular dynamics simulation
multiple sequence alignment
phylogenetic bias
phylogenetic correlation
residue coevolution
Molecular dynamics simulations and statistical coupling analysis reveal functional coevolution network of oncogenic mutations in the CDKN2A-CDK6 complex
期刊论文
FEBS LETTERS, 2013, 卷号: 587, 期号: 2, 页码: 136-141
作者:
Wang JW
;
Zhao YQ
;
Wang YJ
;
Huang JF[*]
收藏
  |  
浏览/下载:7/0
  |  
提交时间:2013/09/24
Inter-protein coevolution
Oncogenic mutations
Melanoma
Molecular dynamics simulation
CDK6-CDKN2A complex
The Coevolution of Phycobilisomes: Molecular Structure Adapting to Functional Evolution
期刊论文
COMPARATIVE AND FUNCTIONAL GENOMICS, 2011, 页码: 230236
作者:
Shi, Fei
;
Qin, Song
;
Wang, Yin-Chu
收藏
  |  
浏览/下载:12/0
  |  
提交时间:2012/03/06
Multiple Sequence Alignment
Crystal-structure Analysis
2.2 Angstrom Resolution
C-phycocyanin
Spirulina-platensis
Statistical-methods
Lacks Thylakoids
Protein Residues
Cyanobacterium
Phycobiliproteins
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