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科研机构
山东大学 [20]
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期刊论文 [18]
会议论文 [2]
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2019 [3]
2018 [2]
2017 [1]
2016 [3]
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专题:山东大学
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An approximation algorithm for genome sorting by reversals to recover all adjacencies
期刊论文
JOURNAL OF COMBINATORIAL OPTIMIZATION, 2019, 卷号: 37, 期号: 4, 页码: 1170-1190
作者:
Zhai, Shanshan
;
Zhang, Peng
;
Zhu, Daming
;
Tong, Weitian
;
Xu, Yao
收藏
  |  
浏览/下载:14/0
  |  
提交时间:2019/12/11
Genome rearrangement
Sorting by reversals
Gene adjacency
Maximum
matching
Alternating cycle
Characterisation of the complete mitochondrial genome of the black-footed abalone Haliotis iris
期刊论文
NEW ZEALAND JOURNAL OF ZOOLOGY, 2019, 卷号: 46, 期号: 1, 页码: 74-86
作者:
Guo, Zhansheng
;
Jiang, Zhaoyang
;
Han, Leng
;
Ding, Yi
;
Hou, Xuguang
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/12/11
Genome rearrangement
Haliotis iris
mitochondrial DNA
mitogenome
structure
New Zealand
A 2-Approximation Scheme for Sorting Signed Permutations by Reversals, Transpositions, Transreversals, and Block-Interchanges
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2019, 卷号: 16, 期号: 5, 页码: 1702-1711
作者:
Hao, FanChang
;
Zhang, Melvin
;
Leong, Hon Wai
收藏
  |  
浏览/下载:6/0
  |  
提交时间:2019/12/11
Genomics
Bioinformatics
Sorting
Approximation algorithms
Bridges
Transforms
Electronic mail
Genome rearrangement
genome sorting
approximation algorithm
reversal
transreversal
transposition
block-interchange
breakpoint graph
bridge structures
Can a breakpoint graph be decomposed into none other than 2-cycles?
期刊论文
THEORETICAL COMPUTER SCIENCE, 2018, 卷号: 734, 页码: 38-45
作者:
Pu, Lianrong
;
Lin, Yu
;
Zhu, Daming
;
Jiang, Haitao
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/11
Algorithm
Complexity
Breakpoint graph
Genome rearrangement
Cycle
decomposition
An approximation algorithm for genome sorting by reversals to recover all adjacencies
期刊论文
Journal of Combinatorial Optimization, 2018
作者:
Zhai S.
;
Zhang P.
;
Zhu D.
;
Tong W.
;
Xu Y.
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/12/11
Alternating cycle
Gene adjacency
Genome rearrangement
Maximum matching
Sorting by reversals
A 2-Approximation Scheme for Sorting Signed Permutations by Reversals, Transpositions, Transreversals, and Block-Interchanges
期刊论文
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2017
作者:
HAO F.
;
ZHANG M.
;
Leong H.W.
收藏
  |  
浏览/下载:7/0
  |  
提交时间:2019/12/12
approximation algorithm
Approximation algorithms
Bioinformatics
blockinterchange
breakpoint graph
bridge structures
Bridges
Electronic mail
genome rearrangement
genome sorting
Genomics
reversal
Sorting
Transforms
transposition
transreversal
An O(n(3)) algorithm for sorting signed genomes by reversals, transpositions, transreversals and block-interchanges
期刊论文
JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2016, 卷号: 14, 期号: 1
作者:
Yu, Shuzhi
;
Hao, Fanchang
;
Leong, Hon Wai
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/16
Algorithm
genome rearrangement
genome sorting
approximation
algorithm
reversal
transreversal
transposition
block-interchange
Can a Breakpoint Graph be Decomposed into None Other Than 2-Cycles?
期刊论文
Frontiers in Algorithmics, FAW 2016, 2016, 卷号: 9711, 页码: 205-214
作者:
Pu, Lianrong
;
Jiang, Haitao
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/12/16
Breakpoint graph
Genome rearrangement
Cycle decomposition
SA New Approximation Algorithm for Unsigned Translocation Sorting
会议论文
16th International Workshop on Algorithms in Bioinformatics (WABI), AUG 22-24, 2016
作者:
Pu, Lianrong
;
Zhu, Daming
;
Jiang, Haitao
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/31
Algorithm
Complexity
Approximation
Genome
Rearrangement
Translocation
A factor-(1.408 + ε) approximation for sorting unsigned genomes by reciprocal translocations
期刊论文
Theoretical Computer Science, 2015, 卷号: 607, 页码: 166-180
作者:
Jiang H.
;
Wang L.
;
Zhu B.
;
Zhu D.
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/17
Approximation algorithms
Computational genomics
Genome rearrangement
NP-hardness
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