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科研机构
西安交通大学 [31]
内容类型
会议论文 [18]
期刊论文 [13]
发表日期
2019 [3]
2018 [10]
2017 [10]
2016 [2]
2015 [1]
2014 [1]
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专题:西安交通大学
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A graph-based algorithm for estimating clonal haplotypes of tumor sample from sequencing data.
期刊论文
BMC medical genomics, 2019, 卷号: 12, 页码: 27
作者:
Wang Yixuan
;
Zhang Xuanping
;
Ding Shuai
;
Geng Yu
;
Liu Jianye
收藏
  |  
浏览/下载:14/0
  |  
提交时间:2019/11/19
Clonal haplotype
Sequencing data analysis
Computational pipeline
Cancer genomics
Haplotype phasing
Clonal architectures predict clinical outcome in clear cell renal cell carcinoma
期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10
作者:
Huang, Yi
;
Wang, Jiayin
;
Jia, Peilin
;
Li, Xiangchun
;
Pei, Guangsheng
收藏
  |  
浏览/下载:23/0
  |  
提交时间:2019/11/19
Clinical factors associated with circulating tumor DNA (ctDNA) in primary breast cancer.
期刊论文
Molecular oncology, 2019
作者:
Zhou Yidong
;
Xu Yaping
;
Gong Yuhua
;
Zhang Yanyan
;
Lu Yaping
收藏
  |  
浏览/下载:35/0
  |  
提交时间:2019/11/19
primary breast cancer
concordance
next-generation sequencing
circulating cell-free DNA
clinical factors
A computational method for detecting the associations between multiple loci and phenotypes
会议论文
作者:
Zhao, Zhongmeng
;
Huang, Jiali
;
Xu, Mingzhe
;
Liu, Ruoyu
;
He, Siyu
收藏
  |  
浏览/下载:11/0
  |  
提交时间:2019/11/19
disease association study
computational method
swarm optimization
multiple-loci-multiple-phenotype problem
Correcting genomic deletion calls with complex boundaries from next generation sequencing data
会议论文
作者:
Zhao, Zhongmeng
;
Tian, Zewen
;
Geng, Yu
;
He, Siyu
;
Zhang, Xuanping
收藏
  |  
浏览/下载:22/0
  |  
提交时间:2019/11/19
next generation sequencing data analysis
tumor clonity
structural variant detection
genomic deletion with complex boundaries
Cancer genomics
TNSim: A Tumor Sequencing Data Simulator for Incorporating Clonality Information
会议论文
作者:
Geng, Yu
;
Zhao, Zhongmeng
;
Xu, Mingzhe
;
Zhang, Xuanping
;
Xiao, Xiao
收藏
  |  
浏览/下载:17/0
  |  
提交时间:2019/11/19
Cancer genomics
Cancer sequencing data
Clonal structure
Data simulators
Effective analysis
Next-generation sequencing
Single nucleotides
Statistical features
Online integrated allocation of berths and quay cranes in container terminals with 1-lookahead
期刊论文
JOURNAL OF COMBINATORIAL OPTIMIZATION, 2018, 卷号: 36, 页码: 617-636
作者:
Pan, Jiayin
;
Xu, Yinfeng
;
Zhang, Guiqing
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/11/19
Scheduling
Container terminal
Online algorithm
Lookahead information
Estimating the length distributions of genomic micro-satellites from next generation sequencing data
会议论文
作者:
Feng, Xuan
;
Hu, Huan
;
Zhao, Zhongmeng
;
Zhang, Xuanping
;
Wang, Jiayin
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/11/19
Estimation approaches
Expectation-maximization algorithms
Length distributions
Micro satellite
Next-generation sequencing
Potential researches
Probabilistic approaches
State-of-the-art approach
An Efficient Algorithm for Sensitively Detecting Circular RNA from RNA-seq Data.
期刊论文
International journal of molecular sciences, 2018, 卷号: 19
作者:
Zhang Xuanping
;
Wang Yidan
;
Zhao Zhongmeng
;
Wang Jiayin
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2019/11/26
local similar sequence
de novo detection
RNA-seq
high sensitivity
CIGenotyper: A machine learning approach for genotyping complex indel calls
会议论文
作者:
Zheng, Tian
;
Li, Yang
;
Geng, Yu
;
Zhao, Zhongmeng
;
Zhang, Xuanping
收藏
  |  
浏览/下载:11/0
  |  
提交时间:2019/11/26
Complex indel
Computational problem
Genomic structural variant
Genotyping
Machine learning approaches
Relevance Vector Machine
State-of-the-art approach
Structural variations
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