Phylogenetic relationships of Acheilognathidae (Cypriniformes: Cyprinoidea) as revealed from evidence of both nuclear and mitochondrial gene sequence variation: Evidence for necessary taxonomic revision in the family and the identification of cryptic species

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	Phylogenetic relationships of Acheilognathidae (Cypriniformes: Cyprinoidea) as revealed from evidence of both nuclear and mitochondrial gene sequence variation: Evidence for necessary taxonomic revision in the family and the identification of cryptic species
	Chang, Chia-Hao 1,2,3; Li, Fan 4,5; Shao, Kwang-Tsao 1; Lin, Yeong-Shin 2,6; Morosawa, Takahiro 7; Kim, Sungmin 8; Koo, Hyeyoung 9; Kim, Won 8; Lee, Jae-Seong 10; He, Shunping 11
刊名	MOLECULAR PHYLOGENETICS AND EVOLUTION
	2014-12-01
卷号	81 期号:*页码:182-194
关键词	Acheilognathinae Cyprinidae Cryptic species Nuclear loci Cytochrome b European bitterling
ISSN号	1055-7903
英文摘要	Bitterlings are relatively small cypriniform species and extremely interesting evolutionarily due to their unusual reproductive behaviors and their coevolutionary relationships with freshwater mussels. As a group, they have attracted a great deal of attention in biological studies. Understanding the origin and evolution of their mating system demands a well-corroborated hypothesis of their evolutionary relationships. In this study, we provide the most comprehensive phylogenetic reconstruction of species relationships of the group based on partitioned maximum likelihood and Bayesian methods using DNA sequence variation of nuclear and mitochondrial genes on 41 species, several subspecies and three undescribed species. Our findings support the monophyly of the Acheilognathidae. Two of the three currently recognized genera are not monophyletic and the family can be subdivided into six clades. These clades are further regarded as genera based on both their phylogenetic relationships and a reappraisal of morphological characters. We present a revised classification for the Acheilognathidae with five genera/lineages: Rhodeus, Acheilognathus (new constitution), Tanakia (new constitution), Paratanakia gen. nov., and Pseudorhodeus gen. nov. and an unnamed clade containing five species currently referred to as "Acheilognathus". Gene trees of several bitterling species indicate that the taxa are not monophyletic. This result highlights a potentially dramatic underestimation of species diversity in this family. Using our new phylogenetic framework, we discuss the evolution of the Acheilognathidae relative to classification, taxonomy and biogeography. (C) 2014 Elsevier Inc. All rights reserved.
WOS标题词	Science & Technology ; Life Sciences & Biomedicine
类目[WOS]	Biochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
研究领域[WOS]	Biochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
关键词[WOS]	TELEOSTEI CYPRINIDAE ; MOLECULAR PHYLOGENY ; MAXIMUM-LIKELIHOOD ; RHODEUS-SERICEUS ; BITTERLING FISH ; UNIONID MUSSELS ; SENIOR SYNONYM ; YANGTZE-RIVER ; CHINA ; EVOLUTION
收录类别	SCI
语种	英语
WOS记录号	WOS:000345953100017
公开日期	2015-01-20
内容类型	期刊论文
源URL	[http://ir.ihb.ac.cn/handle/342005/20278]
专题	水生生物研究所_水生生物多样性与资源保护研究中心_期刊论文
作者单位	1.Acad Sinica, Biodivers Res Ctr, Taipei 11529, Taiwan 2.Natl Chiao Tung Univ, Dept Biol Sci & Technol, Hsinchu 30068, Taiwan 3.St Louis Univ, Dept Biol, St Louis, MO 63103 USA 4.Natl Sun Yat Sen Univ, Dept Oceanog, Kaohsiung 80424, Taiwan 5.Fudan Univ, Minist Educ, Key Lab Biodivers Sci & Ecol Engn, Inst Biodivers Sci, Shanghai 200433, Peoples R China 6.Natl Chino Tung Univ, Inst Bioinformat & Syst Biol, Hsinchu 30068, Taiwan 7.Japan Wildlife Res Ctr, Tokyo 1308606, Japan 8.Seoul Natl Univ, Sch Biol Sci, Seoul 151747, South Korea 9.Sangji Univ, Dept Biol Sci, Wonju 220702, South Korea 10.Sungkyunkwan Univ, Dept Biol Sci, Suwon 440746, South Korea
推荐引用方式 GB/T 7714	Chang, Chia-Hao,Li, Fan,Shao, Kwang-Tsao,et al. Phylogenetic relationships of Acheilognathidae (Cypriniformes: Cyprinoidea) as revealed from evidence of both nuclear and mitochondrial gene sequence variation: Evidence for necessary taxonomic revision in the family and the identification of cryptic species[J]. MOLECULAR PHYLOGENETICS AND EVOLUTION,2014,81(*):182-194.
APA	Chang, Chia-Hao.,Li, Fan.,Shao, Kwang-Tsao.,Lin, Yeong-Shin.,Morosawa, Takahiro.,...&Mayden, Richard L..(2014).Phylogenetic relationships of Acheilognathidae (Cypriniformes: Cyprinoidea) as revealed from evidence of both nuclear and mitochondrial gene sequence variation: Evidence for necessary taxonomic revision in the family and the identification of cryptic species.MOLECULAR PHYLOGENETICS AND EVOLUTION,81(*),182-194.
MLA	Chang, Chia-Hao,et al."Phylogenetic relationships of Acheilognathidae (Cypriniformes: Cyprinoidea) as revealed from evidence of both nuclear and mitochondrial gene sequence variation: Evidence for necessary taxonomic revision in the family and the identification of cryptic species".MOLECULAR PHYLOGENETICS AND EVOLUTION 81.*(2014):182-194.