Complete genome sequence of piezotolerant Stutzerimonas kunmingensis 7850S isolated from the sediment of the Mariana Trench | |
Jia-Wei Wang1,4; Kun Shang4; Sheng-Yi Wu3; Bo-Yu Zhu4; Mei-Gui Han4; Yuan Zhao2,4; Yi-Qiu Chen1,4; Jia Xie1; Bo Huang1; Zhuang Han4 | |
刊名 | Marine Genomics |
2022-10 | |
卷号 | 66页码:100996 |
关键词 | Stutzerimonas kunmingensis 7850S High hydrostatic pressure Genome Environment adaption |
ISSN号 | 1874-7787 |
DOI | 10.1016/j.margen.2022.100996 |
通讯作者 | Zhuang Han |
英文摘要 | Stutzerimonas kunmingensis 7850S is a piezotolerant bacterium isolated from the sediment of the Mariana trench. Here, we described the complete genome of strain 7850S, which contains a single circular chromosome of 4,775,870 base pairs with 62.66% G + C content, and harbors 4494 protein-coding genes, 65 transfer RNA genes, and 12 ribosomal RNA genes. The experimental results showed that strain 7850S could grow under hydrostatic pressure of 0.1–70 MPa. Genomic analyses led to identifications of numbers of high hydrostatic pressure-associated genes, such as the ones associated with unsaturated fatty acids, betaine, and ectoine. A complete set of denitrification genes and some heavy metal detoxification genes were also found in this strain. The presence of these genes suggests metabolic characteristics for adaption to hadal environments and provides insights to further understand adaption strategies and ecological roles of Stutzerimonas in hadal environments. |
资助项目 | Major Scientific and Techno-logical Projects of Hainan Province ; Na-tional Key Research & Development Program of China ; [ZDKJ2019011] ; [2018YFC0309800] |
WOS关键词 | BACTERIUM |
WOS研究方向 | Genetics & Heredity ; Marine & Freshwater Biology |
语种 | 英语 |
出版者 | ELSEVIER |
WOS记录号 | WOS:000891471600001 |
资助机构 | Major Scientific and Techno-logical Projects of Hainan Province ; Na-tional Key Research & Development Program of China |
内容类型 | 期刊论文 |
源URL | [http://ir.idsse.ac.cn/handle/183446/9823] |
专题 | 深海科学研究部_深海生物学研究室_深海微生物活性物质研究组 |
通讯作者 | Zhuang Han |
作者单位 | 1.Hainan University, Haikou, Hainan, 570228, China 2.Hainan Topical Ocean University, Sanya, Hainan, 572000, China. 3.BGI-Sanya, BGI-Shenzhen, Sanya, Hainan, 572025, China. 4.Institute of Deep-sea Science and Engineering, Chinese Academy of Science, Sanya, Hainan, 572000, China. |
推荐引用方式 GB/T 7714 | Jia-Wei Wang,Kun Shang,Sheng-Yi Wu,et al. Complete genome sequence of piezotolerant Stutzerimonas kunmingensis 7850S isolated from the sediment of the Mariana Trench[J]. Marine Genomics,2022,66:100996. |
APA | Jia-Wei Wang.,Kun Shang.,Sheng-Yi Wu.,Bo-Yu Zhu.,Mei-Gui Han.,...&Zhuang Han.(2022).Complete genome sequence of piezotolerant Stutzerimonas kunmingensis 7850S isolated from the sediment of the Mariana Trench.Marine Genomics,66,100996. |
MLA | Jia-Wei Wang,et al."Complete genome sequence of piezotolerant Stutzerimonas kunmingensis 7850S isolated from the sediment of the Mariana Trench".Marine Genomics 66(2022):100996. |
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