Procedures for the Analysis of Comparative Data Using Phylogenetically Independent Contrasts
Theodore Garland Jr. ; Paul H. Harvey ; Anthony R. Ives
刊名Systematic Biology
1992
卷号41期号:1页码:18-32
中文摘要

We discuss and clarify several aspects of applying Felsenstein's (1985, Am. Nat. 125: 1–15) procedures to test for correlated evolution of continuous traits. This is one of several available comparative methods that maps data for phenotypic traits onto an existing phylogenetic tree (derived from independent information). Application of Felsenstein's method does not require an entirely dichotomous topology. It also does not require an assumption of gradual, clocklike character evolution, as might be modeled by Brownian motion. Almost any available information can be used to estimate branch lengths (e.g., genetic distances, divergence times estimated from the fossil record or from molecular clocks, numbers of character changes from a cladistic analysis). However, the adequacy for statistical purposes of any proposed branch lengths must be verified empirically for each phytogeny and for each character. We suggest a simple way of doing this, based on graphical analysis of plots of standardized independent contrasts versus their standard deviations (i.e., the square roots of the sums of their branch lengths). In some cases, the branch lengths and/or the values of traits being studied will require transformation. An example involving the scaling of mammalian home range area is presented. Once adequately standardized, sets of independent contrasts can be analyzed using either linear or nonlinear (multiple) regression. In all cases, however, regressions (or correlations) must be computed through the origin. We also discuss ways of correcting for body size effects and how this relates to making graphical representations of relationships of standardized independent contrasts. We close with a consideration of the types of traits that can be analyzed with independent contrasts procedures and conclude that any (continuous) trait that is inherited from ancestors is appropriate for analysis, regardless of the mechanism of inheritance (e.g., genetic or cultural).

公开日期2013-11-15
内容类型期刊论文
源URL[http://ir.xtbg.org.cn/handle/353005/4762]  
专题西双版纳热带植物园_文献共享
推荐引用方式
GB/T 7714
Theodore Garland Jr.,Paul H. Harvey,Anthony R. Ives. Procedures for the Analysis of Comparative Data Using Phylogenetically Independent Contrasts[J]. Systematic Biology,1992,41(1):18-32.
APA Theodore Garland Jr.,Paul H. Harvey,&Anthony R. Ives.(1992).Procedures for the Analysis of Comparative Data Using Phylogenetically Independent Contrasts.Systematic Biology,41(1),18-32.
MLA Theodore Garland Jr.,et al."Procedures for the Analysis of Comparative Data Using Phylogenetically Independent Contrasts".Systematic Biology 41.1(1992):18-32.
个性服务
查看访问统计
相关权益政策
暂无数据
收藏/分享
所有评论 (0)
暂无评论
 

除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。


©版权所有 ©2017 CSpace - Powered by CSpace