Combining Polygenic Risk Score and Voice Features to Detect Major Depressive Disorders
Di, Yazheng1,2; Wang, Jingying3; Liu, Xiaoqian1,2; Zhu, Tingshao1,2
刊名FRONTIERS IN GENETICS
2021-12-20
通讯作者邮箱tszhu@psych.ac.cn (tingshao zhu )
卷号12页码:9
关键词biomarkers polygenic risk score (PRS) computer technology major depressive disorder (MDD) voice biomarkers depression
DOI10.3389/fgene.2021.761141
产权排序1
文献子类实证研究
英文摘要

Background: The application of polygenic risk scores (PRSs) in major depressive disorder (MDD) detection is constrained by its simplicity and uncertainty. One promising way to further extend its usability is fusion with other biomarkers. This study constructed an MDD biomarker by combining the PRS and voice features and evaluated their ability based on large clinical samples.Methods: We collected genome-wide sequences and utterances edited from clinical interview speech records from 3,580 women with recurrent MDD and 4,016 healthy people. Then, we constructed PRS as a gene biomarker by p value-based clumping and thresholding and extracted voice features using the i-vector method. Using logistic regression, we compared the ability of gene or voice biomarkers with the ability of both in combination for MDD detection. We also tested more machine learning models to further improve the detection capability.Results: With a p-value threshold of 0.005, the combined biomarker improved the area under the receiver operating characteristic curve (AUC) by 9.09% compared to that of genes only and 6.73% compared to that of voice only. Multilayer perceptron can further heighten the AUC by 3.6% compared to logistic regression, while support vector machine and random forests showed no better performance.Conclusion: The addition of voice biomarkers to genes can effectively improve the ability to detect MDD. The combination of PRS and voice biomarkers in MDD detection is feasible. This study provides a foundation for exploring the clinical application of genetic and voice biomarkers in the diagnosis of MDD.

收录类别SCI
资助项目Key Research Program of the Chinese Academy of Sciences[ZDRW-XH-2019-4]
WOS关键词MENTAL-DISORDERS ; GENETIC RISK ; DISEASE ; EPIDEMIOLOGY ; PREDICTION ; MODELS ; TWIN
WOS研究方向Genetics & Heredity
语种英语
出版者FRONTIERS MEDIA SA
WOS记录号WOS:000738857100001
资助机构Key Research Program of the Chinese Academy of Sciences
内容类型期刊论文
源URL[http://ir.psych.ac.cn/handle/311026/41782]  
专题心理研究所_中国科学院行为科学重点实验室
通讯作者Zhu, Tingshao
作者单位1.Univ Chinese Acad Sci, Dept Psychol, Beijing, Peoples R China
2.Chinese Acad Sci, Inst Psychol, Key Lab Behav Sci, Beijing, Peoples R China
3.Hong Kong Polytech Univ, Fac Hlth & Social Sci, Sch Optometry, Hong Kong, Peoples R China
推荐引用方式
GB/T 7714
Di, Yazheng,Wang, Jingying,Liu, Xiaoqian,et al. Combining Polygenic Risk Score and Voice Features to Detect Major Depressive Disorders[J]. FRONTIERS IN GENETICS,2021,12:9.
APA Di, Yazheng,Wang, Jingying,Liu, Xiaoqian,&Zhu, Tingshao.(2021).Combining Polygenic Risk Score and Voice Features to Detect Major Depressive Disorders.FRONTIERS IN GENETICS,12,9.
MLA Di, Yazheng,et al."Combining Polygenic Risk Score and Voice Features to Detect Major Depressive Disorders".FRONTIERS IN GENETICS 12(2021):9.
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