Phylogenetic and Phenogenetic Diversity of Synechococcus along a Yellow Sea Section Reveal Its Environmental Dependent Distribution and Co-Occurrence Microbial Pattern

doi:10.3390/jmse9091018

CORC > 深海科学与工程研究所 > 中国科学院深海科学与工程研究所 > 研究生部

	Phylogenetic and Phenogenetic Diversity of Synechococcus along a Yellow Sea Section Reveal Its Environmental Dependent Distribution and Co-Occurrence Microbial Pattern
	Wang, Ting 1,4,5,6; Chen, Xi 2; Qin, Song 6; Li, Jialin 3,6
刊名	JOURNAL OF MARINE SCIENCE AND ENGINEERING
	2021-09-01
卷号	9 期号:9 页码:16
关键词	Synechococcus phylogenetic diversity pigment type high-throughput sequencing coastal ecosystem
DOI	10.3390/jmse9091018
英文摘要	Synechococcus is a dominant genus of the coastal phytoplankton with an effective contribution to primary productivity. Here, the phylogenetic and phenogenetic composition of Synechococcus in the coastal Yellow Sea was addressed by sequencing marker gene methods. Meanwhile, its co-occurrence pattern with bacterial and eukaryotic microbes was further investigated based on the construction of networks. The result revealed that Synechococcus abundance ranged from 9.8 x 10(2) cells mL(-1) to 1.6 x 10(5) cells mL(-1), which was significantly correlated to sampling depth and nutrient contents of nitrite, ammonia, and dissolved silicon. A total of eight Synechococcus phylogenetic lineages were detected, of which clade III was dominant in most of the samples. Meanwhile, clade I increased along the water column and even reached a maximum value of 76.13% at 20 m of station B. Phenogenetically, Synechococcus PT3 was always the predominant pigment type across the whole study zone. Only salinity was significantly correlated to the phenogenetic constitution. The networks revealed that Synechococcus co-occurred with 159 prokaryotes, as well as 102 eukaryotes including such possible grazers as Gymnodinium clades and Alveolata. Potential function prediction further showed that microbes co-occurring with Synechococcus were associated with diverse element cycles, but the exact mechanism needed further experimentation to verify. This research promotes exploring regularity in the genomic composition and niche position of Synechococcus in the coastal ecosystem and is significant to further discuss its potential participation in materials circulation and bottom-up effects in microbial food webs.
资助项目	Key Deployment Project of the Centre for Ocean Mega-Science, Chinese Academy of Sciences[COMS2020Q09] ; National Key Research and Development Program of China[2018YFD0901102]
WOS关键词	EAST CHINA SEA ; MARINE CYANOBACTERIA PROCHLOROCOCCUS ; PHYCOERYTHRIN-RICH SYNECHOCOCCUS ; TEMPORAL VARIATION ; NITROGEN-FIXATION ; GENETIC DIVERSITY ; COASTAL WATERS ; LIGHT ; PHYTOPLANKTON ; PHYLOGEOGRAPHY
WOS研究方向	Engineering ; Oceanography
语种	英语
出版者	MDPI
WOS记录号	WOS:000699877300001
资助机构	Key Deployment Project of the Centre for Ocean Mega-Science, Chinese Academy of Sciences ; National Key Research and Development Program of China
内容类型	期刊论文
源URL	[http://ir.idsse.ac.cn/handle/183446/8865]
专题	研究生部
通讯作者	Li, Jialin
作者单位	1.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 2.Ocean Univ China, Coll Marine Life Sci, Qingdao 266005, Peoples R China 3.Chinese Acad Sci, Ctr Ocean Mega Sci, Qingdao 266071, Peoples R China 4.Chinese Acad Sci, Inst Deep Sea Sci & Engn, Sanya 572000, Peoples R China 5.Ocean Univ China, Coll Environm Sci & Engn, Qingdao 266100, Peoples R China 6.Chinese Acad Sci, Yantai Inst Coastal Zone Res, Key Lab Coastal Biol & Biol Resource Utilizat, Yantai 264003, Peoples R China
推荐引用方式 GB/T 7714	Wang, Ting,Chen, Xi,Qin, Song,et al. Phylogenetic and Phenogenetic Diversity of Synechococcus along a Yellow Sea Section Reveal Its Environmental Dependent Distribution and Co-Occurrence Microbial Pattern[J]. JOURNAL OF MARINE SCIENCE AND ENGINEERING,2021,9(9):16.
APA	Wang, Ting,Chen, Xi,Qin, Song,&Li, Jialin.(2021).Phylogenetic and Phenogenetic Diversity of Synechococcus along a Yellow Sea Section Reveal Its Environmental Dependent Distribution and Co-Occurrence Microbial Pattern.JOURNAL OF MARINE SCIENCE AND ENGINEERING,9(9),16.
MLA	Wang, Ting,et al."Phylogenetic and Phenogenetic Diversity of Synechococcus along a Yellow Sea Section Reveal Its Environmental Dependent Distribution and Co-Occurrence Microbial Pattern".JOURNAL OF MARINE SCIENCE AND ENGINEERING 9.9(2021):16.