Data curation and modeling of compositional heterogeneity in insect phylogenomics: A case study of the phylogeny of Dytiscoidea (Coleoptera: Adephaga) | |
Cai, Chenyang (蔡晨阳)2,3,4; Tihelka, Erik1; Pisani, Davide4,5; Donoghue, Philip C. J.4 | |
刊名 | MOLECULAR PHYLOGENETICS AND EVOLUTION |
2020-06-01 | |
卷号 | 147页码:7 |
关键词 | Hydradephaga Hygrobiidae Transcriptomics Compositional heterogeneity Site-heterogeneous model |
ISSN号 | 1055-7903 |
DOI | 10.1016/j.ympev.2020.106782 |
英文摘要 | Diving beetles and their allies are an almost ubiquitous group of freshwater predators. Knowledge of the phylogeny of the adephagan superfamily Dytiscoidea has significantly improved since the advent of molecular phylogenetics. However, despite recent comprehensive phylogenomic studies, some phylogenetic relationships among the constituent families remain elusive. In particular, the position of the family Hygrobiidae remains uncertain. We address these issues by re-analyzing recently published phylogenomic datasets for Dytiscoidea, using approaches to reduce compositional heterogeneity and adopting a site-heterogeneous mixture model. We obtained a consistent, well-resolved, and strongly supported tree. Consistent with previous studies, our analyses support Aspidytidae as the monophyletic sister group of Amphizoidae, and more importantly, Hygrobiidae as the sister of the diverse Dytiscidae, in agreement with morphology-based phylogenies. Our analyses provide a backbone phylogeny of Dytiscoidea, which lays the foundation for better understanding the evolution of morphological characters, life habits, and feeding behaviors of dytiscoid beetles. |
资助项目 | Strategic Priority Research Program of the Chinese Academy of Sciences[XDB26000000] ; National Natural Science Foundation of China[41688103] ; Second Tibetan Plateau Scientific Expedition and Research[2019QZKK0706] ; Newton International Fellowship from the Royal Society |
WOS关键词 | 18S RIBOSOMAL-RNA ; SYSTEMATIC POSITION ; MERUIDAE COLEOPTERA ; LARVAL MORPHOLOGY ; WATER BEETLES ; EVOLUTION ; ASPIDYTIDAE ; FAMILY ; RECONSTRUCTION ; AMPHIZOIDAE |
WOS研究方向 | Biochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity |
语种 | 英语 |
出版者 | ACADEMIC PRESS INC ELSEVIER SCIENCE |
WOS记录号 | WOS:000527791400009 |
资助机构 | Strategic Priority Research Program of the Chinese Academy of Sciences ; National Natural Science Foundation of China ; Second Tibetan Plateau Scientific Expedition and Research ; Newton International Fellowship from the Royal Society |
内容类型 | 期刊论文 |
源URL | [http://ir.nigpas.ac.cn/handle/332004/31853] |
专题 | 中国科学院南京地质古生物研究所 |
通讯作者 | Cai, Chenyang (蔡晨阳); Donoghue, Philip C. J. |
作者单位 | 1.Hartpury Coll, Dept Anim Sci, Hartpury GL19 3BE, England 2.Chinese Acad Sci, Nanjing Inst Geol & Palaeontol, State Key Lab Palaeobiol & Stratig, Nanjing 210008, Peoples R China 3.Chinese Acad Sci, Ctr Excellence Life & Paleoenvironm, Nanjing 210008, Peoples R China 4.Univ Bristol, Sch Earth Sci, Life Sci Bldg,Tyndall Ave, Bristol BS8 1TQ, Avon, England 5.Univ Bristol, Sch Biol Sci, Life Sci Bldg,Tyndall Ave, Bristol BS8 1TQ, Avon, England |
推荐引用方式 GB/T 7714 | Cai, Chenyang ,Tihelka, Erik,Pisani, Davide,et al. Data curation and modeling of compositional heterogeneity in insect phylogenomics: A case study of the phylogeny of Dytiscoidea (Coleoptera: Adephaga)[J]. MOLECULAR PHYLOGENETICS AND EVOLUTION,2020,147:7. |
APA | Cai, Chenyang ,Tihelka, Erik,Pisani, Davide,&Donoghue, Philip C. J..(2020).Data curation and modeling of compositional heterogeneity in insect phylogenomics: A case study of the phylogeny of Dytiscoidea (Coleoptera: Adephaga).MOLECULAR PHYLOGENETICS AND EVOLUTION,147,7. |
MLA | Cai, Chenyang ,et al."Data curation and modeling of compositional heterogeneity in insect phylogenomics: A case study of the phylogeny of Dytiscoidea (Coleoptera: Adephaga)".MOLECULAR PHYLOGENETICS AND EVOLUTION 147(2020):7. |
个性服务 |
查看访问统计 |
相关权益政策 |
暂无数据 |
收藏/分享 |
除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。
修改评论