The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis

doi:10.1080/23802359.2020.1721032

	The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis
	Xu, Jinshi 1,3; Dang, Han 2; Li, Huaizhu 3
刊名	MITOCHONDRIAL DNA PART B-RESOURCES
	2020-04-02
卷号	5 期号:2 页码:1134-1135
关键词	Cirsium shansiense chloroplast genome phylogenetic analysis
DOI	10.1080/23802359.2020.1721032
通讯作者	Li, Huaizhu(lihuaizhu121@126.com)
英文摘要	Cirsium shansiense is a common species in China, which can be used for traditional Chinese medicine. The chloroplast (cp) genome of C. shansiense exhibited a typical quadripartite cycle with 152,396 bp, including a pair of inverted repeat regions (IRa and IRb, 25,072 bp each), a large single-copy region (LSC, 83,517 bp), and a small single-copy region (SSC, 18,735 bp). One-hundred-thirty-three unique genes were assembled in the cp genome, including 88 protein genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 17 cp genomes of related species of Asteraceae showed that C. shansiense was closely related to Cirsium vulgare. This study provides important information for identification and conservation of species of Cirsium spp.
资助项目	Public Health Specialty in the Department of Traditional Chinese Medicine[2016-44] ; Public Health Specialty in the Department of Traditional Chinese Medicine[2017-66] ; Public Health Specialty in the Department of Traditional Chinese Medicine[2018-43] ; Public Health Specialty in the Department of Traditional Chinese Medicine[2019-68] ; Natural Science Basic Research Plan in Shaanxi Province of China[2018JM3021] ; State Key Laboratory of Cotton Biology[CB2018A07] ; China Postdoctoral Science Foundation[2018M643715]
WOS研究方向	Genetics & Heredity
语种	英语
出版者	TAYLOR & FRANCIS LTD
WOS记录号	WOS:000517484000001
资助机构	Public Health Specialty in the Department of Traditional Chinese Medicine ; Natural Science Basic Research Plan in Shaanxi Province of China ; State Key Laboratory of Cotton Biology ; China Postdoctoral Science Foundation
内容类型	期刊论文
源URL	[http://ir.ieecas.cn/handle/361006/12684]
专题	地球环境研究所_生态环境研究室
通讯作者	Li, Huaizhu
作者单位	1.Northwest Univ, Sch Life Sci, Xian, Shaanxi, Peoples R China 2.Chinese Acad Sci, Inst Earth Environm, Xian, Shaanxi, Peoples R China 3.Xianyang Normal Univ, Sch Chem & Chem Engn, Xianyang 712000, Shaanxi, Peoples R China
推荐引用方式 GB/T 7714	Xu, Jinshi,Dang, Han,Li, Huaizhu. The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2020,5(2):1134-1135.
APA	Xu, Jinshi,Dang, Han,&Li, Huaizhu.(2020).The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis.MITOCHONDRIAL DNA PART B-RESOURCES,5(2),1134-1135.
MLA	Xu, Jinshi,et al."The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis".MITOCHONDRIAL DNA PART B-RESOURCES 5.2(2020):1134-1135.