Synergistic action of master transcription factors controls epithelial-to-mesenchymal transition | |
Chang, Hongyuan1,6; Liu, Yuwei6; Xue, Mengzhu6; Liu, Haiyue1,2; Du, Shaowei3,6; Zhang, Liwen1,4,5,6; Wang, Peng1,5,6 | |
刊名 | NUCLEIC ACIDS RESEARCH |
2016-04-07 | |
卷号 | 44期号:6页码:2514-2527 |
ISSN号 | 0305-1048 |
DOI | 10.1093/nar/gkw126 |
文献子类 | Article |
英文摘要 | Epithelial-to-mesenchymal transition (EMT) is a complex multistep process in which phenotype switches are mediated by a network of transcription factors (TFs). Systematic characterization of all dynamic TFs controlling EMT state transitions, especially for the intermediate partial-EMT state, represents a highly relevant yet largely unexplored task. Here, we performed a computational analysis that integrated time-course EMT transcriptomic data with public cistromic data and identified three synergistic master TFs (ETS2, HNF4A and JUNB) that regulate the transition through the partial-EMT state. Overexpression of these regulators predicted a poor clinical outcome, and their elimination readily abolished TGF-beta-induced EMT. Importantly, these factors utilized a clique motif, physically interact and their cumulative binding generally characterized EMT-associated genes. Furthermore, analyses of H3K27ac ChIP-seq data revealed that ETS2, HNF4A and JUNB are associated with super-enhancers and the administration of BRD4 inhibitor readily abolished TGF-beta-induced EMT. These findings have implications for systematic discovery of master EMT regulators and super-enhancers as novel targets for controlling metastasis. |
资助项目 | National Natural Science Foundation of China (NSFC)[31271413] ; Science and Technology Commission of Shanghai Municipality[12DZ1910800] ; Chinese Academy of Sciences 'Hundred Talent Program'[00000000] |
WOS关键词 | TGF-BETA ; SUPER-ENHANCERS ; REGULATORY NETWORKS ; CELL-MIGRATION ; CANCER ; EXPRESSION ; PROGRESSION ; METASTASIS ; INHIBITION ; ACTIVATION |
WOS研究方向 | Biochemistry & Molecular Biology |
语种 | 英语 |
出版者 | OXFORD UNIV PRESS |
WOS记录号 | WOS:000374570500014 |
内容类型 | 期刊论文 |
源URL | [http://119.78.100.183/handle/2S10ELR8/276079] |
专题 | 中国科学院上海药物研究所 |
通讯作者 | Wang, Peng |
作者单位 | 1.Univ Chinese Acad Sci, 19A Yuquan Rd, Beijing 100049, Peoples R China; 2.Chinese Acad Sci, Shanghai Inst Biol Sci, Shanghai Inst Biochem & Cell Biol, 320 Yueyang Rd, Shanghai 200031, Peoples R China; 3.Shanghai Univ, Sch Life Sci, 333 Nanchen Rd, Shanghai 200444, Peoples R China; 4.Chinese Acad Sci, Shanghai Inst Mat Med, 555 Zu Chong Zhi Rd,Zhangjiang High Tech Pk, Shanghai 201203, Peoples R China; 5.ShanghaiTech Univ, Sch Life Sci & Technol, 100 Haike Rd,Zhangjiang High Tech Pk, Shanghai 201210, Peoples R China 6.Chinese Acad Sci, Shanghai Adv Res Inst, Lab Syst Biol, 100 Haike Rd,Zhangjiang High Tech Pk, Shanghai 201210, Peoples R China; |
推荐引用方式 GB/T 7714 | Chang, Hongyuan,Liu, Yuwei,Xue, Mengzhu,et al. Synergistic action of master transcription factors controls epithelial-to-mesenchymal transition[J]. NUCLEIC ACIDS RESEARCH,2016,44(6):2514-2527. |
APA | Chang, Hongyuan.,Liu, Yuwei.,Xue, Mengzhu.,Liu, Haiyue.,Du, Shaowei.,...&Wang, Peng.(2016).Synergistic action of master transcription factors controls epithelial-to-mesenchymal transition.NUCLEIC ACIDS RESEARCH,44(6),2514-2527. |
MLA | Chang, Hongyuan,et al."Synergistic action of master transcription factors controls epithelial-to-mesenchymal transition".NUCLEIC ACIDS RESEARCH 44.6(2016):2514-2527. |
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