Complete chloroplast genome of the threatened Rhoiptelea chiliantha (Juglandaceae s.l.)

doi:10.1007/s12686-018-1021-4

CORC > 昆明植物研究所 > 中国科学院昆明植物研究所 > 资源植物与生物技术所级重点实验室

	Complete chloroplast genome of the threatened Rhoiptelea chiliantha (Juglandaceae s.l.)
	Geng, Yan-Fei 1,5,6; Hu, Guo-Xiong2 ; Wang, Shuo 3; Xu, Jian-Chu4,5
刊名	CONSERVATION GENETICS RESOURCES
	2019-09-01
卷号	11 期号:3 页码:317-319
关键词	Rhoiptelea chiliantha Rhoipteleaceae Juglandaceae Chloroplast genome
ISSN号	1877-7252
DOI	10.1007/s12686-018-1021-4
通讯作者	Wang, Shuo(shuowang0811@163.com) ; Xu, Jian-Chu(jxu@mail.kib.ac.cn)
英文摘要	Rhoiptelea chiliantha is the only species of traditionally defined family Rhoipteleaceae which is confined to S Guizhou, SE Yunnan, N and W Guangxi of China as well as N Vietnam, and is evaluated as vulnerable (VU) in "The IUCN Red List Threatened Species" and "Chinese Species Red List". Here, we de novo assembled the complete chloroplast (cp) genome of R. chiliantha using Illumina sequencing data for the first time. The whole cp genome was 161,692 bp in length consisting of a pair of inverted repeat (IRa and IRb) regions of respectively 25,335 bp, a small single-copy region of 23,659 bp and a large single-copy region of 89,039 bp. The genome encoded 116 unique genes including 85 protein-coding genes, 27 tRNA genes and four rRNA genes. Phylogenetic analysis based on 21 complete cp genome sequences indicates that R. chiliantha is sister to the traditionally defined walnut family (Juglandaceae s.s.) and supports to merge Rhoipteleaceae into Juglandaceae s.l.
WOS研究方向	Biodiversity & Conservation ; Genetics & Heredity
语种	英语
WOS记录号	WOS:000480748400017
内容类型	期刊论文
源URL	[http://ir.kib.ac.cn/handle/151853/68370]
专题	昆明植物研究所_资源植物与生物技术所级重点实验室
通讯作者	Wang, Shuo; Xu, Jian-Chu
作者单位	1.Yunnan Univ, Inst Ecol & Geobot, Kunming 650091, Yunnan, Peoples R China 2.Guizhou Univ, Coll Life Sci, Guiyang 550025, Guizhou, Peoples R China 3.Qingdao Univ Sci & Technol, Coll Marine Sci & Biol Engn, Qingdao 266042, Shandong, Peoples R China 4.World Agroforestry Ctr East & Cent Asia, Kunming 650201, Yunnan, Peoples R China 5.Chinese Acad Sci, Kunming Inst Bot, Key Lab Econ Plants & Biotechnol, Kunming 650201, Yunnan, Peoples R China 6.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
推荐引用方式 GB/T 7714	Geng, Yan-Fei,Hu, Guo-Xiong,Wang, Shuo,et al. Complete chloroplast genome of the threatened Rhoiptelea chiliantha (Juglandaceae s.l.)[J]. CONSERVATION GENETICS RESOURCES,2019,11(3):317-319.
APA	Geng, Yan-Fei,Hu, Guo-Xiong,Wang, Shuo,&Xu, Jian-Chu.(2019).Complete chloroplast genome of the threatened Rhoiptelea chiliantha (Juglandaceae s.l.).CONSERVATION GENETICS RESOURCES,11(3),317-319.
MLA	Geng, Yan-Fei,et al."Complete chloroplast genome of the threatened Rhoiptelea chiliantha (Juglandaceae s.l.)".CONSERVATION GENETICS RESOURCES 11.3(2019):317-319.