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Crystal structure of dna gyrase b ' domain sheds lights on the mechanism for t-segment navigation
Fu, Guangsen1,2; Wu, Jinjun2,3; Liu, Wei4; Zhu, Deyu1,2; Hu, Yonglin1; Deng, Jiaoyu3; Zhang, Xian-En3; Bi, Lijun1; Wang, Da-Cheng1
刊名Nucleic acids research
2009-09-01
卷号37期号:17页码:5908-5916
ISSN号0305-1048
DOI10.1093/nar/gkp586
通讯作者Bi, lijun(blj@sun5.ibp.ac.cn)
英文摘要Dna gyrase is an indispensible marvelous molecular machine in manipulating the dna topology for the prokaryotes. in the 'two-gate' mechanism of dna topoisomerase, t-segment navigation from n- to dna-gate is a critical step, but the structural basis supporting this scheme is unclear. the crystal structure of dna gyrase b' subfragment from mycobacterium tuberculosis reveals an intrinsic homodimer. the two subunits, each consisting of a tail and a toprim domain, are tightly packed one another to form a 'crab-like' organization never observed previously from yeast topo ii. structural comparisons show two orientational alterations of the tail domain, which may be dominated by a 43-residue peptide at the b' module c-terminus. a highly conserved pentapeptide mediates large-scale intrasubunit conformational change as a hinge point. mutational studies highlight the significant roles of a negatively charge cluster on a groove at dimer interface. on the basis of structural analysis and mutation experiments, a sluice-like model for t-segment transport is proposed.
WOS关键词ARCHAEON SULFOLOBUS-SHIBATAE ; N-TERMINAL FRAGMENT ; X-RAY-SCATTERING ; ESCHERICHIA-COLI ; TOPOISOMERASE-II ; A SUBUNIT ; BINDING ; VI ; IA ; IDENTIFICATION
WOS研究方向Biochemistry & Molecular Biology
WOS类目Biochemistry & Molecular Biology
语种英语
出版者OXFORD UNIV PRESS
WOS记录号WOS:000271569100030
内容类型期刊论文
URI标识http://www.corc.org.cn/handle/1471x/2375539
专题武汉病毒研究所
通讯作者Bi, Lijun
作者单位1.Chinese Acad Sci, Inst Biophys, Natl Lab Biomacromol, Beijing 100101, Peoples R China
2.Chinese Acad Sci, Grad Univ, Beijing 100039, Peoples R China
3.Chinese Acad Sci, Wuhan Inst Virol, State Key Lab Virol, Wuhan 430071, Peoples R China
4.Karolinska Inst, Novum, Dept Biosci & Nutr, Ctr Struct Biochem, S-14157 Huddinge, Sweden
推荐引用方式
GB/T 7714
Fu, Guangsen,Wu, Jinjun,Liu, Wei,et al. Crystal structure of dna gyrase b ' domain sheds lights on the mechanism for t-segment navigation[J]. Nucleic acids research,2009,37(17):5908-5916.
APA Fu, Guangsen.,Wu, Jinjun.,Liu, Wei.,Zhu, Deyu.,Hu, Yonglin.,...&Wang, Da-Cheng.(2009).Crystal structure of dna gyrase b ' domain sheds lights on the mechanism for t-segment navigation.Nucleic acids research,37(17),5908-5916.
MLA Fu, Guangsen,et al."Crystal structure of dna gyrase b ' domain sheds lights on the mechanism for t-segment navigation".Nucleic acids research 37.17(2009):5908-5916.
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