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	A draft sequence of the rice genome (Oryza sativa L. ssp indica)
	Yu, J; Hu, SN; Wang, J; Wong, GKS; Li, SG; Liu, B; Deng, YJ; Dai, L; Zhou, Y; Zhang, XQ
Source	SCIENCE
	2002
Volume	296Issue:5565Pages:79-92
Keyword	Transposable Elements Arabidopsis-thaliana Human Genes Comparative Genetics Biallelic Markers Grass Genomes Cpg Islands Dna Plants Identification
ISSN	0036-8075
English Abstract	We have produced a draft sequence of the rice genome for the most widely cultivated subspecies in China, Oryza sativa L. ssp. indica, by whole-genome shotgun sequencing. The genome was 466 megabases in size, with an estimated 46,022 to 55,615 genes. Functional coverage in the assembled sequences was 92.0%. About 42.2% of the genome was in exact 20-nucleotide oligomer repeats, and most of the transposons were in the intergenic regions between genes. Although 80.6% of predicted Arabidopsis thaliana genes had a homolog in rice, only 49.4% of predicted rice genes had a homolog in A. thaliana. The large proportion of rice genes with no recognizable homologs is due to a gradient in the GC-content of rice coding sequences.
Subject	Physics
URL	查看原文
WOS ID	WOS:000174858800038
Available Date	2012-08-29
Content Type	期刊论文
源URL	[http://ir.itp.ac.cn/handle/311006/13544]
Collection	理论物理研究所_理论物理所1978-2010年知识产出
Corresponding Author	Yuan, LP , Chinese Acad Sci, Inst Genet, Beijing 100101, Peoples R China.
Recommended Citation GB/T 7714	Yu, J,Hu, SN,Wang, J,et al. A draft sequence of the rice genome (Oryza sativa L. ssp indica)[J]. SCIENCE,2002,296(5565):79-92.
APA	Yu, J.,Hu, SN.,Wang, J.,Wong, GKS.,Li, SG.,...&Yuan, LP , Chinese Acad Sci, Inst Genet, Beijing 100101, Peoples R China..(2002).A draft sequence of the rice genome (Oryza sativa L. ssp indica).SCIENCE,296(5565),79-92.
MLA	Yu, J,et al."A draft sequence of the rice genome (Oryza sativa L. ssp indica)".SCIENCE 296.5565(2002):79-92.

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