The U.S. Environmental Protection Agency Great Lakes National Program Office (GLNPO) water quality survey (WQS) constitutes the longest-running, most extensive monitoring of water quality and the lower trophic level biota of the Laurentian Great Lakes, and has been instrumental in tracking shifts in nutrients and the lower food web over the past several decades. The initial impetus for regular monitoring of the Great Lakes was provided by the 1972 Great Lakes Water Quality Agreement (GLWQA) which asked the parties to develop monitoring and surveillance programs to ensure compliance with the goals of the agreement. The resulting monitoring plan, eventually known as the Great Lakes International Surveillance Plan (GLISP), envisioned a nine-year rotation of intensive surveys of the five lakes. A broadening of the scope of the GLWQA in 1978 and the completion of the first nine-year cycle of sampling, prompted reappraisals of the GLISP. During this pause, and using knowledge gained from GLISP, GLNPO initiated an annual WQS with the narrower focus of tracking water quality changes and plankton communities in the offshore waters of the lakes. Beginning in 1983 with lakes Erie, Huron, and Michigan, the WQS added Lake Ontario in 1986 and Lake Superior in 1992, evolving into its current form in which all five lakes are sampled twice a year. The WQS is unique in that all five lakes are sampled by one agency, using one vessel and one principal laboratory for each parameter group, and represents an invaluable resource for managing and understanding the Great Lakes.