Analysis of Codon Usage in Lilium longiflorum Thunb.

CORC > 中国农业科学院 > 蔬菜花卉研究所

	Analysis of Codon Usage in Lilium longiflorum Thunb.
	Xu, L. F.; Feng, H. Y.; Liang, Y.; Yuan, S. X.; Liu, C.; Ming, J.
刊名	INTERNATIONAL CONFERENCE ON GERMPLASM OF ORNAMENTALS
	2013
卷号	977 页码:219-224
关键词	Lilium longiflorum Thunb. codon usage codon preference
ISSN号	0567-7572
通讯作者	Xu, L. F.
英文摘要	The coding sequence of 123 selected proteins in Easter lily (Lilium longiflorum Thunb.) were analyzed using Codon W and CUSP programs. The frequency of codon usage that encoded amino acids was calculated and compared with dicotyledons and monocotyledons plants including soybean (Glycine max), cotton (Gossypium hirsutum), rice (Oryza sativa), wheat (Triticum aestivum). The results indicated that 1) the third position of codons in L. longiflorum was rich in G or C; 2) the content of G + C was equal to the A + U, it tends to use the codons ending with G or C; 3) six codons are determined as the optimal codons of L. longiflorum: CAU, CGU, ACC, GCC, GAG, GGC, which showed some difference from other monocots; 4) the codon usage frequency was obviously different from the dicotyledons such as soybean and cotton, but had a consistency in codon preference with the monocotyledons such as rice and wheat. We should apply these findings for L. longiflorum gene-transformation and selections of the high-efficient expression system.
学科主题	Agronomy ; Horticulture
语种	英语
出版者	INT SOC HORTICULTURAL SCIENCE
WOS记录号	WOS:000323819200025
内容类型	期刊论文
源URL	[http://111.203.20.206/handle/2HMLN22E/101075]
专题	蔬菜花卉研究所
作者单位	Chinese Acad Agr Sci, Inst Vegetables & Flowers, Beijing 100081, Peoples R China
推荐引用方式 GB/T 7714	Xu, L. F.,Feng, H. Y.,Liang, Y.,et al. Analysis of Codon Usage in Lilium longiflorum Thunb.[J]. INTERNATIONAL CONFERENCE ON GERMPLASM OF ORNAMENTALS,2013,977:219-224.
APA	Xu, L. F.,Feng, H. Y.,Liang, Y.,Yuan, S. X.,Liu, C.,&Ming, J..(2013).Analysis of Codon Usage in Lilium longiflorum Thunb..INTERNATIONAL CONFERENCE ON GERMPLASM OF ORNAMENTALS,977,219-224.
MLA	Xu, L. F.,et al."Analysis of Codon Usage in Lilium longiflorum Thunb.".INTERNATIONAL CONFERENCE ON GERMPLASM OF ORNAMENTALS 977(2013):219-224.